| Introduction |
 | Vendor |
| Contact |
| About |
| Overview |
| Download |
| System Requirements |
| Installation |
| Updating |
| Getting Started |
| Trial Licenses |
| Technical Support |
| Legal Notes |
| Companies and Trademarks |
| Credits |
| License and Warranty |
| Fingerprint Analysis - Theoretics |
| Fingerprinting Basics |
| Generating Fingerprint Data |
| Workflow |
| Trace Processing |
| Smoothing Details |
| Baselining Details |
| Peak Detection |
| Peak Filtering |
| Fragment Sizing |
| Peak mobility |
| Applying a size standard template |
| Sizing |
| Peak Comparison |
| Binning Definitions |
| Hyperbinning Details - Examples |
| Proofreading |
| Cluster Analysis |
| Distance Methods |
| Distance Measures |
| UPGMA Method |
| Explanation of the Term 'Ultrametric' |
| Neighbor-Joining Method |
| Principal Coordinates Analysis |
| GelQuest Manual |
| Data Management |
| Project Management |
| Sample Details |
| Adding and Deleting Samples |
| Arranging Samples |
| Data import |
| Import of trace data |
| Import of image data |
| Data Evaluation |
| Scaling |
| Navigating in the trace data |
| Data evaluation |
| Data export |
| Export of Trace Data |
| Export of Peak Data |
| Binary Matrix (01 Matrix) - Data Export |
| Hyperbin Export as Table |
| Data Analysis |
| Trace Processing and Peak Detection |
| Data Analysis Steps |
| Hyperbinning |
| Hyperbin Table |
| Defining a new size standard template |
| Troubleshooting |
| Data Analysis Troubleshooting |
| I can't see any DNA fingerprint trace data |
| Split Peaks |
| Too many peaks were detected |
| Peaks are not aligned in the size standard channel |
| Unusual peaks |
| Frequentily asked questions (FAQ) |
| What kind of analysis can GelQuest do? |
| Short protocol |
| How does GelQuest store the results of DNA fingerprints analysis? |
| Why are the size standard peaks of different samples not aligned? |
| How many DNA fingerprints can I see on my screen in a single view? |
| What kind of DNA fingerprints can GelQuest analyze? |
| What kind of data can I import into GelQuest? |
| Can I make a final decision which peaks should be present in the binary matrix and which one not? |
| How can I scale |
| Further Processing |
| Download, Updating and Installing |
| Where can I download the latest release? |
| How do I install the software? |
| How can I update my software? |
| What are the system requirements to run GelQuest and ClusterVis? |
| My trial license expired. Can I get a new trial license? |
| I requested a trial license but did not receive it by email. What can I do? |
| Ordering and pricing |
| Can I get some tentative price for SequentiX software? |
| Where can I order SequentiX software? |
| Miscellaneous |
| Citing this software |
| Is the software compatible with other software? |
| References |
| Annex |
| File Structures |
| GelQuest Project File Structure |
| GelQuest Size Standard Template File Structure |